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Publications

The Southeast Environmental Research Center has been around for over 25 years. Here you can browse all of our available publications by published year. If you are not able to access the publication, please contact the lead author.

 

  • 2018
    • Benigni, P., Porter, J., Ridgeway, M.E., Park, M.A., Fernandez-Lima F. Increasing Analytical Separation and Duty Cycle with Nonlinear Analytical Mobility Scan Functions in TIMS-FT-ICR MS. Analytical Chemistry (2018). View publication

    • Davis, S.E., R. Boucek, E. Castañeda-Moya, S. Dessu, E.E. Gaiser, J.S. Kominoski, J.P. Sah, D. Surratt, and T.G. Troxler. Episodic disturbances drive nutrient dynamics along freshwater-to-estuary gradients in a subtropical wetland. Ecosphere (2018).

    • Du, Y., Ramirez C. E., and Jaffé R. Fractionation of Dissolved Organic Matter by Co-Precipitation with Iron: Effects of Composition. Environmental Processes. (2018) 5: 5. View publication

    • Griffin, L.P., J.W. Brownscombe, A.J. Adams, R. Boucek, J.T. Finn, M.R. Heithaus, J.S. Rehage, S.J. Cooke, A.J. Danylchuk. Keeping up with the Silver King: Using cooperative acoustic telemetry networks to quantify the movements of Atlantic tarpon (Megalops atlanticus) in the coastal waters of the southeastern United States. Fisheries Research Vol. 205, Pages 65-76 (2018). View publication

    • Jaramillo, F., I. Brown, P. Castellazzi, L. Espinosa, A. Guittard, S.-H. Hong, V.H. Rivera-Monroy, S. Wdowinski. Assessment of hydrologic connectivity in an ungauged wetland with InSAR observations. Environmental Research Letters 13(2), (2018). View publication.

    • Mazzei, V., E.E. Gaiser. Diatoms as tools for inferring ecotone boundaries in a coastal freshwater wetland threatened by saltwater intrusion. Ecological Indicators, 2018. Vol. 88, Pages 190-204. View publication. 

    • Meng, B., Li, Y., Cui, W., Jiang, P., Liu, G., Wang, Y., Richards, J., Feng, X., and Cai, Y. 2018. Tracing the Uptake, Transport, and Fate of Mercury in Sawgrass (Cladium jamaicense) in the Florida Everglades Using a Multi-isotope Technique. Environmental Science and Technology 52(6):3384-3391. View publication.

    • Peng Shang, YueHan Lu, YingXun Du, Rudolf Jaffé, Robert H. Findlay, Anne Wynn. Climatic and watershed controls of dissolved organic matter variation in streams across a gradient of agricultural land use. 2018 Science of the Total Environment, Vol. 612 Pages 1442-1453. View publication. 

    • Prieto Estrada, Andres & Price, René & Scinto, Leonard & Maurrasse, Florentin & Dreschel, Thomas & Sklar, Fred & Cline, Eric. Lithologic controls on hydrologic and geochemical processes in constructed Everglades tree islands. Chemical Geology (2018). View publication

    • Sah, J. P., Ruiz, P. L., and Ross, M. S. 2018. Spatio-temporal pattern of plant communities along a hydrologic gradient in Everglades tree islands. Forest Ecology and Management 421:16-31. View publication.

    • Sola, Andres D., and Marazzi, Luca and Flores, Monica M. and Kominoski, John S. and Gaiser, Evelyn E. Short-Term Effects of Drying-Rewetting and Long-Term Effects of Nutrient Loading on Periphyton N:P Stoichiometry. Water 2018, 10(2), 105. View publication

    • William Anderson and Heather Black. Data report: organic matter, carbonate, and stable isotope stratigraphy from IODP Expedition 346 Sites U1426, U1427, and U1429. Scientist Proceedings of the Integrated Ocean Drilling Program (2018). View publication. 
  • 2017
    • Carrie E. Rebenack, Paolo Cherubini, and William T. Anderson (2018) Developing a Carbon Isotope Chronology for a Coastal Subtropical Tree Species with Variable Subannual Tree-Ring Growth. Journal of Coastal Research. View publication.

    • Khan, Alia & Wagner, Sasha & Jaffe, Rudolf & Xian, Peng & Williams, Mark & Armstrong, Richard & Mcknight, Diane. (2017). Dissolved black carbon in the global cryosphere: concentrations and chemical signatures: DBC in the global cryosphere. Geophysical Research Letters. 10.1002/2017GL073485. View publication.

    • Pisani, O., Gao, M., Maie, N., Miyoshi, T., Childers D., and Jaffé R. 2018. Compositional aspects of herbaceous litter decomposition in the freshwater marshes of the Florida Everglades. Plant and Soil 423: 87. View publication.

    • Santos, F., Wagner, S., Rothstein, D., Jaffe, R., & Miesel, J. R. (2017). Impact of a historical fire event on pyrogenic carbon stocks and dissolved pyrogenic carbon in spodosols in northern michigan. Frontiers in Earth Science, 5, [80]. DOI: 10.3389/feart.2017.00080. View publication.

    • Wenbin Cui, Guangliang Liu, Mayara Bezerra, Danielle A. Lagos, Yanbin Li, and Yong Cai. Occurrence of Methylmercury in Rice-Based Infant Cereals and Estimation of Daily Dietary Intake of Methylmercury for Infants. Journal of Agricultural and Food Chemistry 2017 65 (44), 9569-9578 DOI: 10.1021/acs.jafc.7b03236. View publication.
  • 2016
    • Hilary Flower, Mark Rains, David Lewis, Jia-Zhong Zhang, René Price. Saltwater intrusion as potential driver of phosphorus release from limestone bedrock in a coastal aquifer. Estuarine, Coastal and Shelf Science Volume 184. 2017. Pages 166-176. ISSN 0272-7714. View publication.

    • B.S. Echols, A.J. Smith, P.R. Gardinali, G.M. Rand. The use of ephyrae of a scyphozoan jellyfish, Aurelia aurita, in the aquatic toxicological assessment of Macondo oils from the Deepwater Horizon incident. Chemosphere. Volume 144. 2016. Pages 1893-1900. ISSN 0045-6535. View publication.

    • Regier P and Jaffé R (2016) Short-Term Dissolved Organic Carbon Dynamics Reflect Tidal, Water Management, and Precipitation Patterns in a Subtropical Estuary. Front. Mar. Sci. 3:250. doi: 10.3389/fmars.2016.00250. View publication.

    • . (2016). Effects of salinity and inundation on microbial community structure and function in a mangrove peat soil. Wetlands 36: 361–371. View publication.

    • Diamond, J., Ross, M. (2016). Canopy gaps do not help establish pioneer species in a South Florida dry forest. Journal of Tropical Ecology,32(2), 107-115. doi:10.1017/S0266467416000109. View publication.

    •  J. Kaal, S. Wagner, R. Jaffé. Molecular properties of ultrafiltered dissolved organic matter and dissolved black carbon in headwater streams as determined by pyrolysis-GC-MS J. Anal. Appl. Pyrolysis, 118 (2016), pp. 181-191. View publication

    • Rehage, Jennifer S.; Blanchard, Jesse R.; Boucek, Ross E.; Lorenz, J. J.; and Robinson, M., "Knocking back invasions: variable resistance and resilience to multiple cold spells in native vs. nonnative fishes" (2016). FCE LTER Journal Articles. 402. View publication. 

    • Dewsbury BM, Bhat M, Fourqurean JW. A review of seagrass economic valuations: Gaps and progress in valuation approaches. Ecosystem Services. 2016;18: 68–77. View publication.

    • Hertkorn, N., Harir, M., Cawley, K. M., Schmitt-Kopplin, P., and Jaffé, R.: Molecular characterization of dissolved organic matter from subtropical wetlands: a comparative study through the analysis of optical properties, NMR and FTICR/MS, Biogeosciences, 13, 2257-2277, https://doi.org/10.5194/bg-13-2257-2016, 2016. View publication

    • J. Wang, K. Sandoval, Y. Ding, D. Stoeckel, A. Minard-Smith, G. Andersen, E.A. Dubinsky, R.Atlas, P. Gardinali. Biodegradation of dispersed Macondo crude oil by indigenous Gulf of Mexico microbial communities Sci. Tot. Environ., 557–558 (2016), pp. 453-468. View publication. 

  • 2015
    • Cristina Romera-Castillo, Rudolf Jaffé. Free radical scavenging (antioxidant activity) of natural dissolved organic matter. Marine Chemistry. Volume 177, Part 4. 2015. Pages 668-676. ISSN 0304-4203. View publication.

    • Fourqurean, J. W., Manuel, S. A., Coates, K. A., Kenworthy, W. J., and Boyer, J. N.: Water quality, isoscapes and stoichioscapes of seagrasses indicate general P limitation and unique N cycling in shallow water benthos of Bermuda, Biogeosciences, 12, 6235-6249. 2015. View publication

    • Lagomasino, D., Price, R. M., Herrera-Silveira, J., Miralles-Wilhelm, F., Merediz-Alonso, G., and Gómez-Hernández, Y. (2015). Connecting groundwater and surface water sources in groundwater dependent coastal wetlands and estuaries: sian Ka'an Biosphere Reserve, Quintana Roo, Mexico. Estuar. Coast. 38, 1744–1763. View publication

    • . 2015. Mosquito control insecticides: a probabilistic ecological risk assessment on drift exposures of naled, dichlorvos (naled metabolite) and permethrin to adult butterflies. Science of the Total Environment 502:252-265. View publication. 

    • Gann, D. & J. Richards, 2015. Quantitative comparison of plant community hydrology using large-extent, long-term data. Wetlands 35: 81–93. View publication. 

    • T.G. Troxler, J.G. Barr, J.D. Fuentes, V. Engel, G. Anderson, C. Sanchez, D. Lagomasino, R.Price, S.E. Davis. Component-specific dynamics of riverine mangrove CO2 efflux in the Florida coastal Everglades. Agric. For. Meteorol., 213 (2015), pp. 273-282. View publication

    • Wagner, S., T. Dittmar, R. Jaffe. 2015. Molecular characterization of dissolved black nitrogen by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Organic Geochemistry 79: 21-30. DOI: 10.1016/j.orggeochem.2014.12.002. View publication. 

    • N.V. Heuett, C.E. Ramirez, A. Fernandez, P.R. GardinaliAnalysis of drugs of abuse by online SPE-LC high resolution mass spectrometry: communal assessment of consumption
      Sci. Total Environ., 511 (2015), pp. 319-330, 10.1016/j.scitotenv.2014.12.043. View publication. 

    • N.V. Heuett, S.R. Batchu, P.R. GardinaliUnderstanding the magnitude of emergent contaminant releases through target screening and metabolite identification using high resolution mass spectrometry: illicit drugs in raw sewage influents. J. Hazard. Mater., 282 (2015), pp. 41-50, 10.1016/j.jhazmat.2014.08.009. View publication. 

    • A.S. Bourque, R. Vega-Thurber, J.W. Fourqurean. Microbial community structure and dynamics in restored subtropical seagrass sediments. Aquat. Microb. Ecol., 74 (2015), pp. 43-57. View publication. 

    •  R.W Parkinson, P.W. Harlem, J.F Meeder. 2015. Managing the Anthropocene marine transgression to the year 2100 and beyond in the State of Florida U.S.A. Climatic Change (2015) 128:8598. View publication.

    • H.O Briceno, A. Serna. 2015. Water quality monitoring project for demonstration of canal remediation methods, Florida Keys. SERC Research Reports. 102. View publication

    • B.M Dewsbury, S. Koptur, J.W. Fourqurean. 2015.Ecosystem Responses to Prescribed Fire Along a Chronosequence in a Subtropical Pine Rockland Habitat. Caribbean Naturalist 24:1-2, 2015. View publication 

    • Y. Cai, G. Liu. 2015. Atomic fluorescence in environmental analysis. Encyclopedia of Analytical Chemistry, 2000, John Wiley & Sons, Ltd. View publication.

    • Y. Ding, Y. Yamashita, J. Jones, R. Jaffe. 2015. Dissolved black carbon in boreal forest and glacial rivers of central Alaska: assessment of biomass burning versus anthropogenic sources. Biogeochemistry 123: 15-25. DOI: 10.1007/s10533-014-0050-7. View publication. 

    • J. E. Campbell, E. A. Lacey, R. A. Decker, S. Crooks, J. W. Fourqurean. Carbon Storage in Seagrass Beds of Abu Dhabi, United Arab Emirates. Estuaries and Coasts (2015) 38: 242. View publication. 

    • Hoch, J. M., E. R. Sokol, A. D. Parker, and J. C. Trexler. 2015. Dispersal strategies among members of the small-fish metacommunity of the Everglades. Copeia 103:157–169. View publication. 

    • Tzortziou, M., Zeri, C., Dimitriou, E., Ding, Y., Jaffé, R., Anagnostou, E., et al. (2015). Colored dissolved organic matter dynamics and anthropogenic influences in a major transboundary river and its coastal wetland. Limnol. Oceanogr. 60, 1222–1240. View publication

    • Tfaily MM, Corbett JE, Wilson R, et al. (2015) Utilization of PARAFAC-modeled excitation-emission matrix (EEM) fluorescence spectroscopy to identify biogeochemical processing of dissolved organic matter in a northern peatland. Photochem Photobiol 91:684–695. View publication.

    • Frankovich TA, Sullivan MJ, Stacy MI. Three new species of Tursiocola (Bacillariophyta) from the skin of the West Indian manatee (Trichechus manatus). Phytotaxa 2015b;204(1):33–48. View publication. 

     

  • 2014
    • Chao Tai, Yanbin Li, Yongguang Yin, Leonard J. Scinto, Guibin Jiang, and Yong Cai. Methylmercury Photodegradation in Surface Water of the Florida Everglades: Importance of Dissolved Organic Matter-Methylmercury Complexation. Environmental Science and Technology. 2014. 48 (13), 7333-7340. View publication.

    • Heithaus MR, Alcoverro T, Arthur R, Burkholder DA, Coates KA, Christianen MJA, Kelkar N, Manuel SA, Wirsing AJ, Kenworthy WJ and Fourqurean JW (2014) Seagrasses in the age of sea turtle conservation and shark overfishing. Front. Mar. Sci. 1:28. doi: 10.3389/fmars.2014.00028. View publication.

    • Y. Ding, A. Watanabe, R. Jaffé. Dissolved black nitrogen (DBN) in freshwater environments Org. Geochem., 68 (2014), pp. 1-4 View publication

    • Stalker, J.C., R.M. Price, V.H. Rivera-Monroy, J. Herrera-Silveira, S. Morales, J.A. Benitez, and D. Alonzo-Parra. Hydrologic dynamics of a subtropical estuary using geochemical tracers, Celestún, Yucatan, Mexico. Estuaries and Coastsdoi (2014) 37: 1376. 10.1007/s12237-014-9778-5. View publication.

    • Timko, S. A., Romera-Castillo, C., Jaffé, R., and Cooper, W. J. (2014). Photo-reactivity of natural dissolved organic matter from fresh to marine waters in the Florida Everglades, USA. Environ. Sci. Process. Impacts 16, 866–878. doi: 10.1039/C3EM00591G. View publication. 

    • Lu Y, Bauer JE, Canuel EA, Chambers R, Yamashita Y, Jaffé R, Barrett A (2014) Effects of land use on sources and ages of inorganic and organic carbon in temperate headwater streams. Biogeochemistry 118. doi: 10.1007/s10533-014-9965-2. View publication. 

    • Ding, Y., Cawley, K. M., da Cunha, C. N., and Jaffé, R. (2014). Environmental dynamics of dissolved black carbon in wetlands. Biogeochemistry 119, 259–273. doi: 10.1007/s10533-014-9964-3. View publication.

    • J.E. Campbell, J.W. Fourqurean. Ocean acidification outweighs nutrient effects in structuring seagrass epiphyte communities J. Ecol., 102 (2014), pp. 730-737. View publication.

    •  C. Romera-Castillo, M.L. Chen, Y. Yamashita, R. Jaffe. Fluorescence characteristics of size-fractionated dissolved organic matter: implications for a molecular assembly based structure? Water Research, 55 (2014), pp. 40-51. View publication. 

    • S.R. BatchuC.E. RamirezP.R. Gardinali. Stability of dioctyl sulfosuccinate (DOSS) towards hydrolysis and photodegradation under simulated solar conditions. Science of the Total Environment, 481 (2014), pp. 260-265. View publication

    • Hoang TC, Rand GM. Effects of Contaminated St. Lucie River Saltwater Sediments on an Amphipod (Ampelisca abdita) and a Hard-Shell Clam (Mercenaria mercenaria). Archives of  Environmental Contamination & Toxicology. 2014 Aug;67(2):224-33. View publication

    • Maie N, Sekiguchi S, Watanabe A, Tsutsuki K, Yamashita Y, Melling L, Cawley KM, Shima E, Jaffé R. (2014) Dissolved organic matter dynamics in the oligo/meso-haline zone of wetland-influenced coastal rivers. Journal of Sea Research, 91:58–69. View publication.

    • J. Wang, P.R. Gardinali. Identification of phase II pharmaceutical metabolites in reclaimed water using high resolution benchtop Orbitrap mass spectrometry. Chemosphere, 107 (2014), pp. 65-73. View publication

    • L. Yehiayan, S. Stice, G. Liu, S. Matulis, L.H. Boise, Y. CaiDimethylarsinothioyl glutathione as a metabolite in human multiple myeloma cell lines upon exposure to darinaparsin. Chemical Research in Toxicology, 27 (2014), pp. 754-764. View publication

    • Lacey EA, Collado-Vides L, Fourqurean JW. Morphological and physiological responses of seagrasses (Alismatales) to grazers (Testudines: Cheloniidae) and the role of these responses as grazing patch abandonment cues. Rev Biol Trop. 2014;62(4):1535–48. pmid:25720186. View publication. 

    • R. Guevara, M. Ikenaga, A. Dean, C. Pisani, J. Boyer. “Changes in Sediment Bacterial Community in Response to Long-Term Nutrient Enrichment in a Subtropical Seagrass-Dominated Estuary.” Microbial Ecology 68 (2014): 427-440. View publication. 

    • Parkos JJ III, Trexler JC. (2014) Origins of functional connectivity in a human-modified wetland landscape. Can J Fish Aquat Sci 71:1–12. View publication

    • A. Watanabe, K. Tsutsuki, Y. Inoue, N. Maie, L. Melling, R. Jaffé. Composition of dissolved organic nitrogen in rivers associated with wetlands. Science of the Total Environment, 493 (2014), pp. 220-228. View publication

    • M. Chen, R. Jaffé. Photo- and bio-reactivity patterns of dissolved organic matter from biomass and soil leachates and surface waters in a subtropical wetland Water Research, 61 (2014), pp. 181-190. View publication

    • Barr, J.G., T. Troxler, R.G. Najjar. 2014. Understanding Coastal Carbon Cycling by Linking Top-Down and Bottom-Up Approaches. Eos, Transactions, American Geophysical Union 95: 315. DOI:10.1002/2014EO350004. View publication. 

    • Ramirez CE, Bellmund S, Gardinali PR (2014) A simple method for routine monitoring of glyphosate and its main metabolite in surface waters using lyophilization and LC-FLD + MS/MS. case study: canals with influence on Biscayne National Park. Science of the Total Environment, 496:389–401. View publication

    • K.M. Cawley, J. Campbell, M. Zwilling, R. Jaffé. Evaluation of forest disturbance legacy effects on dissolved organic matter characteristics in streams at the Hubbard Brook Experimental Forest, New Hampshire. Aquatic Sciences, 76 (2014), pp. 611-622, 10.1007/s00027-014-0358-3. View publication

    • Heithaus, M. R., Alcoverro, T., Arthur, R., Burkholder, D. A., Coates, K. A., Christianen, M. J. A., et al. (2014). Seagrasses in the age of sea turtle conservation and shark overfishing. Front. Mar. Sci. 1:28. doi: 10.3389/fmars.2014.00028. View publication

    • D. He, R.N. Mead, L. Belicka, O. Pisani, R. Jaffé. Assessing source contributions to particulate organic matter in a subtropical estuary: a biomarker approach Organic Geochemistry, 75 (2014), pp. 129-139. View publication. 

    •  &  Fumigant methyl iodide can methylate inorganic mercury species in natural waters. Nature Commun. 5, 4633 (2014). View publication

    • Lagomasino, D.; Price, R.M.; Whitman, D.; Campbell, P.K.E.; Melesse, A. Estimating major ion and nutrient concentrations in mangrove estuaries in Everglades National Park using leaf and satellite reflectance. Remote Sens. Environ. 2014, 154, 202–218. View publication.

    • B. Vera, L. Collado-Vides, C. Moreno, B.I. van Tussenbroek. Halophila stipulacea (Hydrocharitaceae): a recent introduction to the continental waters of Venezuela. Caribb. J. Sci., 48 (2014), pp. 66-70. View publication

    • Collado-Vides, L.; Cassano, V.; Díaz-Larrea, J.; Duran, A.; Medeiros, Amanda d. S.; Sentíes, A. Spread of the introduced species Laurencia caduciramulosa (Rhodomelaceae, Rhodophyta) to the northwest Atlantic: A morphological and molecular analysis. v.183, n.2, p.93-107, 2014. View publication

    • A.F. Rodriguez, A. Serna, L.J. ScintoSoil accretion influenced by elevation, tree density, and substrate on reconstructed tree islands. Soil Sci. Soc. Am. J., 78 (2014), pp. 2090-2099. View publication

    • T.C. Hoang, G.M. RandAcute toxicity and risk assessment of permethrin, naled, and dichlorvos to larval butterflies via Ingestion of contaminated foliage. Chemosphere (2014). View publication. 

    • C.J. Saunders, M. Gao, R. Jaffé. Environmental assessment of vegetation and hydrological conditions in Everglades freshwater marshes using multiple geochemical proxies Aquatic Sciences, 77 (2014), pp. 271-291. View publication.